The Heat Shock Protein Inhibitor Quercetin Attenuates Hepatitis C Virus Production.
Gonzalez O, Fontanes V, Raychaudhuri S, Loo R, Loo J, Arumugaswami V, Sun R, Dasgupta A, and French SW. “The Heat Shock Protein Inhibitor Quercetin Attenuates Hepatitis C Virus Production.” Hepatology 2009: 50, 1756-1764.
Lomenick B, Hao R, Jonai N, Chin RN, Aghajan M, Warburton S, Wang J, Wu RP, Gomez F, Loo JA, Wohlschlegel JA, Vondriska TM, Pelletier J, Herschman HR, Clardy J, Clarke CF, and Huang J. “Target identification using drug affinity responsive target stability (DARTS).” Proc Natl Acad Sci USA 2009; 106: 21984-21989.
Target identification using drug affinity responsive target stability (DARTS).
Anthrax Lethal Toxin Induced Lysosomal Membrane Permeabilization and Cytosolic Cathepsin Release is Nlrp1b/Nalp1b-Depedent.
Averette-Mirrashidi KM, Pratt MR, Yang Y, Bassilian S, Whitelegge JP, Loo JA, Muir TW, and Bradley KA. “Anthrax Lethal Toxin Induced Lysosomal Membrane Permeabilization and Cytosolic Cathepsin Release is Nlrp1b/Nalp1b-Depedent.” PLoS ONE 2009; 4 (11): e7913.
Analysis of PTEN Complex Assembly and Identification of Heterogeneous Nuclear Ribonucleoprotein C as a Component of the PTEN-associated Complex.
Mosessian S, Avliyakulov NK, Mulholland DJ, Boontheung P, Loo JA, and Wu H. “Analysis of PTEN Complex Assembly and Identification of Heterogeneous Nuclear Ribonucleoprotein C as a Component of the PTEN-associated Complex.” J Biol Chem 2009; 284: 30159-30166.
Structural Characterization of Unsaturated Phospholipids Using Traveling Wave Ion Mobility Spectrometry.”
Kim HI, Kim H, Pang ES, Beegle LW, Loo JA, Goddard WA, and Kanik I. “Structural Characterization of Unsaturated Phospholipids Using Traveling Wave Ion Mobility Spectrometry.” Anal Chem 2009; 81: 8289-8297.
Reconstitution of the Mia40-Erv1 Oxidative Folding Pathway for the Small Tim Proteins.
Tienson HL, Dabir DV, Neal SE, Loo R, Hasson SA, Boontheung P, Kim S-K, Loo JA, and Koehler CM. “Reconstitution of the Mia40-Erv1 Oxidative Folding Pathway for the Small Tim Proteins.” Mol Biol Cell 2009; 20: 3481-3490.
Fyn and Src Are Effectors of Oncogenic Epidermal Growth Factor Receptor Signaling in Glioblastoma Patients.
Lu KV, Zhu S, Cvrljevic A, Huang TT, Sarkaria S, Ahkavan D, Dang J, Dinca EB, Plaisier SB, Oderberg I, Lee Y, Chen Z, Caldwell JS, Xie Y, Loo JA, Seligson D, Chakravari A, Lee FY, Weinmann R, Cloughesy TF, Nelson SF, Bergers G, Graeber T, Furnari FB, James CD, Cavenee WK, Johns TG, and Mischel PS. “Fyn and Src Are Effectors of Oncogenic Epidermal Growth Factor Receptor Signaling in Glioblastoma Patients.” Cancer Res 2009; 69: 6889-6898.
Amino Acid Position-specific Contributions to Amyloid b-Protein Oligomerization.
Maji SK, Ogorzalek Loo RR, Inayathullah M, Spring SM, Vollers SS, Condron MM, Bitan G, Loo JA, and Teplow DB. “Amino Acid Position-specific Contributions to Amyloid b-Protein Oligomerization.” J Biol Chem 2009; 284: 23580-23591.
Synthesis of Maleimide-End Functionalized Star Polymers and Multimeric Protein-Polymer Conjugates.
Tao L, Kaddis CS, Ogorzalek Loo RR, Grover GN, Loo JA, Maynard HD. “Synthesis of Maleimide-End Functionalized Star Polymers and Multimeric Protein-Polymer Conjugates.” Macromolecules 2009; 42: 8028-8033.
Analysis of hydrophilic metabolites in physiological fluids by HPLC-MS using a silica hydride-based stationary phase.
Pesek JJ, Matyska MT, Loo JA, Fischer SM, and Sana TR. “Analysis of hydrophilic metabolites in physiological fluids by HPLC-MS using a silica hydride-based stationary phase.” J Sep Sci 2009; 32: 2200-2208.
Electron-induced dissociation of protonated peptides yields backbone fragmentation consistent with a hydrogen-deficient radical.
Ly T, Yin S, Loo JA, and Julian RR. “Electron-induced dissociation of protonated peptides yields backbone fragmentation consistent with a hydrogen-deficient radical.” Rapid Commun Mass Spectrom 2009; 23: 2099-2101. (Erratum: Rapid Commun Mass Spectrom 2010; 24: 242)
Genetic and Proteomic Evidence for Roles of Drosophila SUMO in Cell Cycle Control, Ras Signaling, and Early Pattern Formation.
Nie M, Xie Y, Loo JA, and Courey AJ. “Genetic and Proteomic Evidence for Roles of Drosophila SUMO in Cell Cycle Control, Ras Signaling, and Early Pattern Formation.” PLoS ONE 2009; 4(6): e5905. doi:10.1371/journal.pone.0005905.
An EWOD Digital Microfluidic Chip with Integrated Localized Temperature Control for Multiplex Proteomics Sample Processing.
Nelson WC, Peng I, Loo JA, Garrell RL, and Kim C-J. “An EWOD Digital Microfluidic Chip with Integrated Localized Temperature Control for Multiplex Proteomics Sample Processing.” Proc IEEE Int Conf MEMS, Jan 2009, pp 280-283.
Synthetic Approach to Homodimeric Protein-Polymer Conjugates.
Tao L, Kaddis CS, Ogorzalek Loo RR, Grover GN, Loo JA, and Maynard HD. “Synthetic Approach to Homodimeric Protein-Polymer Conjugates.” Chem Commun 2009; Apr 28;(16): 2148–2150.
S-layer, Surface-Accessible, and Concanavalin A Binding Proteins of Methanosarcina acetivorans and Methanosarcina mazei.
Francoleon DR, Boontheung P, Yang Y, Kim U, Ytterberg AJ, Denny PA, Denny PC, Loo JA, Gunsalus RP, and Ogorzalek Loo RR. “S-layer, Surface-Accessible, and Concanavalin A Binding Proteins of Methanosarcina acetivorans and Methanosarcina mazei.” J Proteome Res 2009; 8: 1972-1982.
Probing the Mechanism of Electron Capture and Electron Transfer Dissociation Using Tags with Variable Electron Affinity.
Sohn CH, Chung CK, Yin S, Ramachandran P, Loo JA, and Beauchamp JL. “Probing the Mechanism of Electron Capture and Electron Transfer Dissociation Using Tags with Variable Electron Affinity.” J Am Chem Soc 2009; 131: 5444-5459.
Glycoprofiling of the Human Salivary Proteome.
Sondej M, Denny PA, Xie Y, Ramachandran P, Si Y, Takashima J, Shi W, Wong DT, Loo JA, and Denny PC. “Glycoprofiling of the Human Salivary Proteome.” Clin Proteomics 2009; 5: 52-68.
Oxidative Stress and Asthma: Proteome Analysis of Chitinase-like Proteins and FIZZ1 in Lung Tissue and Bronchoalveolar Lavage Fluid.
Zhang L, Wang M, Kang X, Boontheung P, Li N, Nel AE, and Loo JA. “Oxidative Stress and Asthma: Proteome Analysis of Chitinase-like Proteins and FIZZ1 in Lung Tissue and Bronchoalveolar Lavage Fluid.” J Proteome Res 2009; 9: 1631-1638.
Increasing Charge While Preserving Noncovalent Protein Complexes for ESI-MS.
Lomeli SH, Yin S, Ogorzalek Loo RR, and Loo JA. “Increasing Charge While Preserving Noncovalent Protein Complexes for ESI-MS.” J Am Soc Mass Spectrom 2009; 20: 593–596.
Effects of Green Tea Extract on Lung Cancer A549 Cells: Proteomic Identification of Proteins Associated with Cell Migration.
Lu Q-Y, Yang Y, Jin YS, Zhang Z-F, Heber D, Li FP, Dubinett SM, Sondej MA, Loo JA, and Rao JY. “Effects of Green Tea Extract on Lung Cancer A549 Cells: Proteomic Identification of Proteins Associated with Cell Migration.” Proteomics 2009; 9: 757-767.
Systematic Comparison of the Human Saliva and Plasma Proteomes.
Yan W, Apweiler R, Balgley BM, Boontheung P, Bundy JL, Cargile BJ, Cole S, Fang X, Gonzalez-Begne M, Griffin TJ, Hagen F, Hu S, Lee CS, Malamud D, Melvin JE, Menon R, Mueller M, Rhodus NL, Sevinsky JR, States D, Stephenson JL Jr, Than S, Yates III JR, Yu W, Xie H, Xie Y, Omenn GS, Loo JA , Wong DT. “Systematic Comparison of the Human Saliva and Plasma Proteomes.” Proteomics Clin Appl 2009; 3: 116-134.